sccoda.model.other_models.AncomModel

class sccoda.model.other_models.AncomModel(data, covariate_column='x_0')

Wrapper for the ancom model for compositional differentiation analysis (Mandal et al., 2015)

Methods

eval_model(ground_truth)

Evaluates array of results for ancom compared to a ground tuth via binary classification.

fit_model([alpha, tau])

type alpha

floatfloat (default: 0.05)