sccoda.model.other_models.ALRModel_wilcoxon.fit_model

ALRModel_wilcoxon.fit_model(reference_cell_type)

Fits ALR model with Wilcoxon rank-sum test

Parameters
reference_cell_type : intint

index of reference cell type

Returns

  • p-values

  • p_val – p-values for differential abundance test of all cell types