sccoda.model.other_models.AncomModel.fit_model

AncomModel.fit_model(alpha=0.05, tau=0.02, *args, **kwargs)

Parameters

alpha : floatfloat (default: 0.05)

FDR level for multiplicity correction

tau : floatfloat (default: 0.02)

cutoff parameter

args

passed to skbio.stats.composition.ancom

kwargs

passed to skbio.stats.composition.ancom