sccoda.model.other_models.CLRModel

class sccoda.model.other_models.CLRModel(data, covariate_column='x_0')

Implements a CLR transform and subsequent linear model on each cell type.

Methods

eval_model(ground_truth[, alpha, fdr_correct])	Evaluates array of p-values compared to a ground truth via binary classification.
fit_model()	Fits CLR model with linear model