sccoda.util.helper_functions.sample_size_estimate¶
-
sccoda.util.helper_functions.
sample_size_estimate
(mcc_desired, increase, lf_increase)¶ calculates the estimated number of required samples for fixed MCC, absolute increase and log2-fold change using the fitted linear model from Büttner, Ostner et al., 2020
Linear model parameters:
(Intercept)
: -1.3675613850217total_samples
: 0.0193158965178381log_fold_increase
: 0.704729538709909log_increase
: 0.315857162659738log_fold_increase
: -0.0927955725385892
- Parameters
- Return type
- Returns
sample size estimate
n_samples – int – estimated number of required samples